Myelin bulb
Ultrastructural Neuropathology in Alzheimer's Models
A myelin bulb in the cortical white matter of 9 months old 3xTg mouse.
Synaptic Circuitry in Gustatory Thalamus
A synaptic triad in the taste thalamus (VPMP) of the Tree Shrew.
Selectivity of Axonal Inputs on Dendrite Segments in the Visual Thalamus
3D reconstructions from electron microscope image stacks
A tree shrew, enjoying its food
Taste Pathways and Behavior in the Tree Shrew (Tupaia Belangeri)
The closest relative of the primates, the tree shrew is a versatile animal model to study sensory systems.
ErisirLab2019
Gilmer Hall Fig Trees are on the background -- they will be no more soon.
OXT in PVN
Oxytocinergic Pathways in the Prairie Vole Brain
ErisirLab2023
Erisir Lab 2023
A group of lab members at CVCSN 2023
retina projections
Tree Shrew Retina Projections
Retinal terminals in sSC
Retinal Axons Densely Innervate Superior Colliculus
Retinal terminals are visualized with a tracer from the contralateral eye of a tree shrew

Recent Publications

  • Kipcak A, Erisir A. CBLN2 promoter enables genetic access to wide-field neurons of the tree shrew superior colliculus.. Cell reports methods. 2026;6(3):101309. doi:10.1016/j.crmeth.2026.101309

    Wide-field (WF) neurons of the tectopulvinar pathway integrate retinal and cortical inputs via large dendritic arbors crucial for rapid visual motion detection. Previous studies identified potential marker genes for mouse WF neurons. Here, we validate CBLN2 as a molecular marker of the tree shrew WF neurons and construct AAVs that exploit CBLN2 promoter to selectively target WF neurons across species. Using intersectional genetics in the tree shrew, we show that WF neuron dendrites receive a distinct pattern of VGluT1+ and VGluT2+ inputs based on their distance from the cell body in the dorsoventral axis of the superior colliculus (SC). This represents the first example of a viral tool derived from the tree shrew genome for cell-type-specific targeting across species. Our results provide a foundation for studying SC circuitry in higher-order mammals and for extending this approach to additional conserved cell types in the SC and other brain regions.

  • Erisir A, Maher EE, Anderson Z, Chawla S, Hanley L, Zhao A, Birisik K, Toklucu ES, Keskinoz EN. Dysregulated oligodendrocyte and myelin dynamics as an early pathological feature of neuropil degeneration in Alzheimer’s disease: an ultrastructural study.. Acta neuropathologica communications. 2026. doi:10.1186/s40478-026-02320-z

    Alzheimer's disease (AD) is a progressive neurodegenerative disorder traditionally defined by the accumulation of amyloid‑β plaques and neurofibrillary tangles. Increasing evidence suggests that white‑matter degeneration and myelin disruption occur early in disease progression and may contribute to neuropathological vulnerability. Here, we performed ultrastructural analyses in the 3xTg and 5xFAD mouse models of AD across developmental stages (3-12 months of age), including ages preceding overt amyloid plaque formation or neuronal loss. We identify a spectrum of oligodendrocyte‑ and myelin‑associated abnormalities, including single‑membrane herniations, myelin outfolds, and ectopic myelination of neuronal processes, which are evident as early as 3 months of age and are frequently associated with altered neuropil architecture and incipient dystrophic neurite morphology. These malformations were confirmed to be oligodendrocyte‑derived through O4 immunolabeling. Collectively, our findings reveal early, widespread myelin‑associated ultrastructural alterations that form a consistent structural component of neuritic pathology in AD models. We propose that dysregulated oligodendrocyte membrane remodeling represents an early pathological feature of AD, providing a framework for future studies examining how glial pathology intersects with neuronal degeneration and plaque‑associated neuritic remodeling.

  • Yuan S, Essepian N, Roberts R, Sherman E, Wang Q, Erisir A, Jiang L. Tau oligomerization induces nuclear lamina invagination and chromatin remodeling in Alzheimer’s disease.. Acta neuropathologica. 2026;151(1). doi:10.1007/s00401-026-03018-1

    The aggregation of the microtubule-associated protein tau into oligomeric complexes is strongly correlated with the onset and progression of neurodegeneration in Alzheimer's disease (AD). Increasing evidence implicates nuclear membrane disruption in AD and related tauopathies; however, whether this is a cause or consequence of neurodegeneration remains unresolved. Here, we show that nuclear lamina disruption emerges at the early Braak stages, coinciding with the initial formation of pathological tau aggregates in post-mortem AD brain tissue. Using the tauopathy mouse model (P301S PS19), we demonstrate that oligomeric tau (oTau) directly binds to the Lamin B Receptor (LBR), inducing nuclear envelope invaginations as revealed by electron microscopy. These structural alterations are accompanied by chromatin remodeling and gene expression dysregulation. To dissect the underlying mechanism, we employed a light-inducible OptoTau system (4R1N Tau::mCherry::Cry2Olig) in human iPSC-derived neurons, enabling real-time visualization of tau aggregation dynamics. This system revealed selective recruitment of oTau to the nuclear envelope and direct interactions with LBR and Lamin B2, leading to nuclear deformation and activation of the protein translational stress response. Together, these findings identify nuclear membrane disruption as an early and potentially causative event in tau-mediated neurodegeneration, establishing a mechanistic link between tau oligomerization, nuclear stress, and chromatin remodeling. Targeting nuclear destabilization may offer new therapeutic avenues for mitigating AD pathogenesis.

  • Liu Y, McDaniel JA, Chen C, Yang L, Kipcak A, Savier EL, Erisir A, Cang J, Campbell JN. Co-Conservation of synaptic gene expression and circuitry in collicular neurons.. Nature communications. 2025;16(1):9146. doi:10.1038/s41467-025-64204-5

    The superior colliculus (SC), a midbrain sensorimotor hub, is anatomically and functionally similar across vertebrates, but how its cell types have evolved is unclear. Using single-nucleus transcriptomics, we compared the SC's molecular and cellular organization in mice, tree shrews, and humans. Despite over 96 million years of evolutionary divergence, we identified  30 consensus neuronal subtypes, including Cbln2+ neurons that form the SC-pulvinar circuit in mice and tree shrews. Synapse-related genes were among the most conserved in the SC, unlike neocortex, suggesting co-conservation of synaptic genes and collicular circuitry. In contrast, cilia-related genes diverged significantly across species, highlighting the potential importance of the neuronal primary cilium in SC evolution. Additionally, we identified an inhibitory SC neuron in tree shrews and humans but not mice. Our findings reveal that the SC has evolved by conserving neuron subtypes, synaptic genes, and circuitry, while diversifying ciliary gene expression and an inhibitory neuron subtype.